Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 LINC00982-205ENST00000420957 435 ntBASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 ACTG1P14-201ENST00000446382 1122 ntBASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 HARS-201ENST00000307633 1780 ntTSL 2 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 AC009949.1-201ENST00000623048 1830 ntBASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 MYCLP1-201ENST00000372451 1075 ntBASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 AL645939.2-201ENST00000427340 991 ntBASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDK11AQ9UQ88 AC100803.2-201ENST00000562459 1963 ntBASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 BCAR1-209ENST00000546196 1340 ntBASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC27.2■■□□□ 1.95
CDK11AQ9UQ88 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 AL031432.2-201ENST00000566714 459 ntBASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 AL928711.1-201ENST00000570165 459 ntBASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDK11AQ9UQ88 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 PUS1-205ENST00000535067 838 ntTSL 3 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 CCND1-203ENST00000536559 553 ntTSL 3 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 POR-209ENST00000439269 1858 ntTSL 2 BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDK11AQ9UQ88 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms