Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SATB2Q9UPW6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
SATB2Q9UPW6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SATB2Q9UPW6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SATB2Q9UPW6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SATB2Q9UPW6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 AC104581.1-202ENST00000635932 2618 ntBASIC17.36■□□□□ 0.37
SATB2Q9UPW6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 BX842568.4-201ENST00000421222 227 ntBASIC17.36■□□□□ 0.37
SATB2Q9UPW6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.36■□□□□ 0.37
SATB2Q9UPW6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 ZNF259P1-201ENST00000407656 1365 ntBASIC17.36■□□□□ 0.37
SATB2Q9UPW6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SATB2Q9UPW6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 FGFR3P6-201ENST00000457012 610 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 AC005336.2-201ENST00000593183 939 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 MTDHP3-201ENST00000594186 672 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 FAM215A-202ENST00000632077 792 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 AC112777.1-201ENST00000540175 1423 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 TP73-AS1-210ENST00000637775 1455 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 AP000997.3-201ENST00000623333 2250 ntBASIC17.35■□□□□ 0.37
SATB2Q9UPW6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SATB2Q9UPW6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms