Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 HNRNPDP1-201ENST00000439535 754 ntBASIC19.05■□□□□ 0.64
CNTN3Q9P232 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTN3Q9P232 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTN3Q9P232 AC132938.5-201ENST00000624980 1813 ntBASIC19.04■□□□□ 0.64
CNTN3Q9P232 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 MIR7706-201ENST00000613747 67 ntBASIC19.04■□□□□ 0.64
CNTN3Q9P232 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 FAM215A-202ENST00000632077 792 ntBASIC19.04■□□□□ 0.64
CNTN3Q9P232 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNTN3Q9P232 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTN3Q9P232 PCDHB18P-201ENST00000524813 2368 ntBASIC19.04■□□□□ 0.64
CNTN3Q9P232 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 AC002558.1-201ENST00000488906 803 ntBASIC19.03■□□□□ 0.64
CNTN3Q9P232 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 AC109462.3-201ENST00000573934 613 ntBASIC19.03■□□□□ 0.64
CNTN3Q9P232 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.03■□□□□ 0.64
CNTN3Q9P232 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTN3Q9P232 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTN3Q9P232 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTN3Q9P232 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTN3Q9P232 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTN3Q9P232 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 AC005104.2-201ENST00000427818 678 ntBASIC19.02■□□□□ 0.64
CNTN3Q9P232 AC079776.4-201ENST00000511039 504 ntBASIC19.02■□□□□ 0.64
CNTN3Q9P232 MTDHP4-201ENST00000600287 670 ntBASIC19.02■□□□□ 0.64
CNTN3Q9P232 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTN3Q9P232 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTN3Q9P232 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTN3Q9P232 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms