Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE2Q9NQ36 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 RN7SKP199-201ENST00000410325 305 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 DRAXINP1-201ENST00000437611 948 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 LINC00265-3P-201ENST00000447588 903 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 AC106795.1-205ENST00000512851 1056 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 TPSP2-201ENST00000561760 610 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 AC090079.2-201ENST00000575289 768 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 NOC2LP1-202ENST00000452600 2235 ntBASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE2Q9NQ36 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE2Q9NQ36 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE2Q9NQ36 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
SCUBE2Q9NQ36 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE2Q9NQ36 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.14■□□□□ 0.5
SCUBE2Q9NQ36 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE2Q9NQ36 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 KRT18P55-202ENST00000578578 1546 ntBASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 AC100803.2-201ENST00000562459 1963 ntBASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 TOB2P1-201ENST00000469761 992 ntBASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE2Q9NQ36 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 AP000568.1-201ENST00000282964 442 ntBASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE2Q9NQ36 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms