Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 AC092910.1-201ENST00000482027 1129 ntBASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 AC012640.2-201ENST00000561606 901 ntBASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 AC068880.1-201ENST00000507289 2297 ntBASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF3Q9HD45 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 AC098831.1-202ENST00000438821 336 ntBASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 NKAPP1-205ENST00000585790 367 ntBASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 AC090340.1-201ENST00000620778 4980 ntBASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF3Q9HD45 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TM9SF3Q9HD45 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TM9SF3Q9HD45 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 ABALON-201ENST00000629058 1903 ntBASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 FAM220CP-201ENST00000395253 831 ntBASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 AC027601.4-201ENST00000611259 610 ntBASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TM9SF3Q9HD45 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 PGAM5P1-201ENST00000518923 814 ntBASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF3Q9HD45 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms