Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 ARMC10P1-201ENST00000313754 855 ntBASIC18.92■□□□□ 0.62
SYNCQ9H7C4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 AC112698.1-201ENST00000510299 916 ntBASIC18.92■□□□□ 0.62
SYNCQ9H7C4 KRT18P35-201ENST00000510488 1269 ntBASIC18.92■□□□□ 0.62
SYNCQ9H7C4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 AC010331.1-201ENST00000611423 582 ntBASIC18.92■□□□□ 0.62
SYNCQ9H7C4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNCQ9H7C4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 FAM86EP-206ENST00000510506 987 ntBASIC18.91■□□□□ 0.62
SYNCQ9H7C4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCQ9H7C4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 PCED1CP-201ENST00000419887 785 ntBASIC18.9■□□□□ 0.62
SYNCQ9H7C4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 MTCL1P1-201ENST00000446207 792 ntBASIC18.9■□□□□ 0.62
SYNCQ9H7C4 BX276092.5-203ENST00000456199 560 ntBASIC18.9■□□□□ 0.62
SYNCQ9H7C4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 IGHV3-41-201ENST00000613121 348 ntBASIC18.9■□□□□ 0.62
SYNCQ9H7C4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SYNCQ9H7C4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms