Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 IGHGP-201ENST00000390555 1178 ntBASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBB1Q9H4B7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 AC060834.1-201ENST00000443027 2032 ntBASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 AL031432.5-201ENST00000641059 760 ntBASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 HTR7P1-202ENST00000624664 4411 ntBASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 AC106886.4-201ENST00000623557 2502 ntBASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TUBB1Q9H4B7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 AC068472.1-201ENST00000474589 881 ntBASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 AC139887.4-201ENST00000607877 719 ntBASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms