Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 CROCCP2-202ENST00000412962 2773 ntBASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 AL023806.1-201ENST00000603994 1649 ntBASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 MIR3180-1-201ENST00000580374 94 ntBASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 MIR3180-3-201ENST00000584616 94 ntBASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 AP002414.4-201ENST00000589764 1148 ntBASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 AL139327.4-201ENST00000612362 153 ntBASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCSER1Q9C0I3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 NPAP1P7-201ENST00000613027 823 ntBASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.8■□□□□ 0.76
CCSER1Q9C0I3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 FAM220CP-201ENST00000395253 831 ntBASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCSER1Q9C0I3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 AL049757.1-201ENST00000616842 1596 ntBASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 AC016396.2-201ENST00000562575 1417 ntBASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCSER1Q9C0I3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms