Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC007322.1-201ENST00000426983 750 ntBASIC14.39□□□□□ -0.11
NKX6-2Q9C056 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 RPS2P52-201ENST00000469610 820 ntBASIC14.39□□□□□ -0.11
NKX6-2Q9C056 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AL355312.1-201ENST00000407115 2176 ntBASIC14.39□□□□□ -0.11
NKX6-2Q9C056 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 AC005181.1-201ENST00000604782 1256 ntBASIC14.38□□□□□ -0.11
NKX6-2Q9C056 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-2Q9C056 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 AC034268.1-201ENST00000441047 882 ntBASIC14.37□□□□□ -0.11
NKX6-2Q9C056 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms