Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 TPM4P1-201ENST00000436100 807 ntBASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 SPDYE13P-201ENST00000445314 798 ntBASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 ZNF444P1-201ENST00000559497 298 ntBASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 AC022211.2-201ENST00000585075 2527 ntBASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 AL023806.1-201ENST00000603994 1649 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 AL138688.1-201ENST00000624851 1594 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 AC009053.2-201ENST00000563701 2365 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 AP001094.4-201ENST00000579008 2176 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 AC112698.1-201ENST00000510299 916 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 RNF126P1-202ENST00000569893 925 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 AC116407.2-201ENST00000613639 860 ntBASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
UPF3BQ9BZI7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UPF3BQ9BZI7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF3BQ9BZI7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 HOMER2P1-201ENST00000455653 964 ntBASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF3BQ9BZI7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms