Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 KLF2P3-201ENST00000451977 1087 ntBASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 MIR4525-201ENST00000580000 75 ntBASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 FO538757.1-201ENST00000623083 1397 ntBASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CNTNAP3Q9BZ76 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNTNAP3Q9BZ76 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 MIR1909-201ENST00000411312 80 ntBASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 AL627223.1-201ENST00000416693 442 ntBASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 AC096734.2-201ENST00000562054 433 ntBASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTNAP3Q9BZ76 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 HAUS4P1-201ENST00000406739 1145 ntBASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 AC107890.1-201ENST00000422478 521 ntBASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 MTCL1P1-201ENST00000446207 792 ntBASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SERBP1P5-201ENST00000510079 1181 ntBASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTNAP3Q9BZ76 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 TREML5P-201ENST00000421694 576 ntBASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 IGHV3-65-201ENST00000523210 341 ntBASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 FAM8A2P-201ENST00000528813 1142 ntBASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms