Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 AC079328.2-201ENST00000561241 3354 ntBASIC11.8□□□□□ -0.52
LITAFQ99732 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 AC004911.1-201ENST00000416316 871 ntBASIC11.8□□□□□ -0.52
LITAFQ99732 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 UNC93B4-201ENST00000505679 747 ntBASIC11.8□□□□□ -0.52
LITAFQ99732 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 RARRES2P10-201ENST00000564312 460 ntBASIC11.8□□□□□ -0.52
LITAFQ99732 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 AC116407.2-201ENST00000613639 860 ntBASIC11.8□□□□□ -0.52
LITAFQ99732 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 AC092053.1-201ENST00000605787 1936 ntBASIC11.8□□□□□ -0.52
LITAFQ99732 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LITAFQ99732 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
LITAFQ99732 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LITAFQ99732 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LITAFQ99732 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 AC004951.3-201ENST00000418645 1148 ntBASIC11.79□□□□□ -0.52
LITAFQ99732 THEM4-205ENST00000489410 643 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC11.79□□□□□ -0.52
LITAFQ99732 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.79□□□□□ -0.52
LITAFQ99732 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 MYC-209ENST00000641252 345 ntBASIC11.79□□□□□ -0.52
LITAFQ99732 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.79□□□□□ -0.52
LITAFQ99732 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.79□□□□□ -0.52
LITAFQ99732 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.79□□□□□ -0.52
LITAFQ99732 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LITAFQ99732 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 HOXB1-202ENST00000577092 1414 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms