Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PKP4Q99569 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PKP4Q99569 AC010460.3-201ENST00000511359 1579 ntBASIC17.27■□□□□ 0.35
PKP4Q99569 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PKP4Q99569 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PKP4Q99569 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PKP4Q99569 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.26■□□□□ 0.35
PKP4Q99569 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.26■□□□□ 0.35
PKP4Q99569 FZD10-202ENST00000539839 3282 ntBASIC17.26■□□□□ 0.35
PKP4Q99569 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.26■□□□□ 0.35
PKP4Q99569 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PKP4Q99569 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 AC092329.2-201ENST00000598402 547 ntBASIC17.26■□□□□ 0.35
PKP4Q99569 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.26■□□□□ 0.35
PKP4Q99569 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PKP4Q99569 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP4Q99569 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PKP4Q99569 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PKP4Q99569 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP4Q99569 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 REXO1L11P-201ENST00000620964 1927 ntBASIC17.25■□□□□ 0.35
PKP4Q99569 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
PKP4Q99569 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PKP4Q99569 AC007967.3-201ENST00000434308 558 ntBASIC17.25■□□□□ 0.35
PKP4Q99569 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.25■□□□□ 0.35
PKP4Q99569 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.25■□□□□ 0.35
PKP4Q99569 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 AP000867.3-201ENST00000524675 377 ntBASIC17.25■□□□□ 0.35
PKP4Q99569 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.25■□□□□ 0.35
PKP4Q99569 Z69720.1-201ENST00000601483 472 ntBASIC17.25■□□□□ 0.35
PKP4Q99569 LINC00896-202ENST00000609602 2128 ntBASIC17.25■□□□□ 0.35
PKP4Q99569 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP4Q99569 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 BX276092.7-203ENST00000637198 1536 ntBASIC17.25■□□□□ 0.35
PKP4Q99569 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP4Q99569 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP4Q99569 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PKP4Q99569 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PKP4Q99569 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PKP4Q99569 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 LTB4R2-202ENST00000528054 3092 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms