Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AC005332.1-201ENST00000577698 1310 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 COX5BP2-201ENST00000392354 334 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 FAM210CP-201ENST00000445714 574 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 GUSBP12-201ENST00000513727 720 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AL049597.2-201ENST00000565575 961 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 AC005336.2-201ENST00000593183 939 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 PCDHA12-202ENST00000613593 2588 ntBASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB18PQ96TA0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 AC091607.1-201ENST00000490318 1060 ntBASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 AL121956.5-201ENST00000625261 221 ntBASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB18PQ96TA0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB18PQ96TA0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHB18PQ96TA0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB18PQ96TA0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB18PQ96TA0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB18PQ96TA0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PCDHB18PQ96TA0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 AC125634.1-201ENST00000438758 1403 ntBASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 AC007967.3-201ENST00000434308 558 ntBASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 KRT8P26-201ENST00000534154 1276 ntBASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 IGHV3-41-201ENST00000613121 348 ntBASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 AC022211.2-201ENST00000585075 2527 ntBASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms