Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 PRORSD1P-201ENST00000295112 541 ntBASIC14.39□□□□□ -0.11
RAB40CQ96S21 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 MFAP1P1-201ENST00000442257 1255 ntBASIC14.39□□□□□ -0.11
RAB40CQ96S21 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 AC142381.4-202ENST00000563973 229 ntBASIC14.39□□□□□ -0.11
RAB40CQ96S21 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 DGCR10-201ENST00000609839 495 ntBASIC14.39□□□□□ -0.11
RAB40CQ96S21 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 AGGF1P2-201ENST00000426656 2106 ntBASIC14.39□□□□□ -0.11
RAB40CQ96S21 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 PCDHB19P-201ENST00000570871 2371 ntBASIC14.39□□□□□ -0.11
RAB40CQ96S21 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB40CQ96S21 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40CQ96S21 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 ABHD17AP1-201ENST00000358206 933 ntBASIC14.38□□□□□ -0.11
RAB40CQ96S21 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 AF186192.3-201ENST00000583427 947 ntBASIC14.38□□□□□ -0.11
RAB40CQ96S21 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 PCDHA14-201ENST00000506751 2298 ntBASIC14.38□□□□□ -0.11
RAB40CQ96S21 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40CQ96S21 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB40CQ96S21 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms