Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 KRT8P47-201ENST00000604727 1398 ntBASIC16.83■□□□□ 0.28
BBS4Q96RK4 AL390719.2-201ENST00000606993 987 ntBASIC16.83■□□□□ 0.28
BBS4Q96RK4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 AC009949.1-201ENST00000623048 1830 ntBASIC16.83■□□□□ 0.28
BBS4Q96RK4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
BBS4Q96RK4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BBS4Q96RK4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 AL645929.1-201ENST00000420084 975 ntBASIC16.82■□□□□ 0.28
BBS4Q96RK4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 AL049597.2-201ENST00000565575 961 ntBASIC16.82■□□□□ 0.28
BBS4Q96RK4 RNF126P1-202ENST00000569893 925 ntBASIC16.82■□□□□ 0.28
BBS4Q96RK4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BBS4Q96RK4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BBS4Q96RK4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 SPDYE13P-201ENST00000445314 798 ntBASIC16.81■□□□□ 0.28
BBS4Q96RK4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 AL355312.1-201ENST00000407115 2176 ntBASIC16.81■□□□□ 0.28
BBS4Q96RK4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms