Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC093677.2-201ENST00000600169 1863 ntBASIC18.75■□□□□ 0.59
ZNF558Q96NG5 AC100803.2-201ENST00000562459 1963 ntBASIC18.75■□□□□ 0.59
ZNF558Q96NG5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 BCL2-203ENST00000589955 5011 ntBASIC18.75■□□□□ 0.59
ZNF558Q96NG5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 AC009949.1-201ENST00000623048 1830 ntBASIC18.74■□□□□ 0.59
ZNF558Q96NG5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 AC097637.2-201ENST00000624096 1997 ntBASIC18.74■□□□□ 0.59
ZNF558Q96NG5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 HTR5BP-201ENST00000430851 1154 ntBASIC18.74■□□□□ 0.59
ZNF558Q96NG5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF558Q96NG5 AC009336.1-201ENST00000608941 1553 ntBASIC18.73■□□□□ 0.59
ZNF558Q96NG5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 AC254562.1-201ENST00000417586 456 ntBASIC18.73■□□□□ 0.59
ZNF558Q96NG5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 MKNK2P1-201ENST00000437526 628 ntBASIC18.73■□□□□ 0.59
ZNF558Q96NG5 METTL21AP1-201ENST00000438852 635 ntBASIC18.73■□□□□ 0.59
ZNF558Q96NG5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 AL078644.1-201ENST00000609881 752 ntBASIC18.73■□□□□ 0.59
ZNF558Q96NG5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF558Q96NG5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 PTCHD3P3-201ENST00000403073 906 ntBASIC18.72■□□□□ 0.59
ZNF558Q96NG5 IGLL3P-201ENST00000412472 434 ntBASIC18.72■□□□□ 0.59
ZNF558Q96NG5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 GGTLC5P-201ENST00000617623 998 ntBASIC18.72■□□□□ 0.59
ZNF558Q96NG5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms