Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 AC005104.2-201ENST00000427818 678 ntBASIC15.27■□□□□ 0.04
CMTM3Q96MX0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 AC098934.4-201ENST00000564127 592 ntBASIC15.27■□□□□ 0.04
CMTM3Q96MX0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CMTM3Q96MX0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 AC022188.1-201ENST00000620960 1664 ntBASIC15.27■□□□□ 0.03
CMTM3Q96MX0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CMTM3Q96MX0 LINC01311-201ENST00000565162 1445 ntBASIC15.26■□□□□ 0.03
CMTM3Q96MX0 LYSMD4-203ENST00000378904 2122 ntBASIC15.26■□□□□ 0.03
CMTM3Q96MX0 OR6D1P-203ENST00000641209 4860 ntBASIC15.26■□□□□ 0.03
CMTM3Q96MX0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 AC005915.1-201ENST00000624912 2018 ntBASIC15.26■□□□□ 0.03
CMTM3Q96MX0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 AC090192.1-201ENST00000517740 490 ntBASIC15.26■□□□□ 0.03
CMTM3Q96MX0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 DGCR10-201ENST00000609839 495 ntBASIC15.26■□□□□ 0.03
CMTM3Q96MX0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMTM3Q96MX0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 MIR4674-201ENST00000582457 87 ntBASIC15.25■□□□□ 0.03
CMTM3Q96MX0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 AC073195.1-201ENST00000607241 877 ntBASIC15.25■□□□□ 0.03
CMTM3Q96MX0 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.25■□□□□ 0.03
CMTM3Q96MX0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.25■□□□□ 0.03
CMTM3Q96MX0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms