Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 KRT18P6-201ENST00000555540 1265 ntBASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 AC008687.5-201ENST00000593746 558 ntBASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 AC010240.3-201ENST00000607688 395 ntBASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NSMCE2Q96MF7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AL135905.2-201ENST00000584934 1404 ntBASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AP003041.3-201ENST00000527151 707 ntBASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NSMCE2Q96MF7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 AC090192.1-201ENST00000517740 490 ntBASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NSMCE2Q96MF7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms