Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 AL139288.1-201ENST00000623748 933 ntBASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMARCD1Q96GM5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 AC002558.1-201ENST00000488906 803 ntBASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 AC109462.3-201ENST00000573934 613 ntBASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 AC073592.5-201ENST00000624854 528 ntBASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 AL356309.3-201ENST00000624132 1934 ntBASIC18.61■□□□□ 0.57
SMARCD1Q96GM5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 AC005104.2-201ENST00000427818 678 ntBASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 IGHV3-52-201ENST00000519770 353 ntBASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCD1Q96GM5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms