Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AP006288.1-201ENST00000446065 395 ntBASIC17.97■□□□□ 0.47
CHFRQ96EP1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 YBX1P5-201ENST00000509441 847 ntBASIC17.97■□□□□ 0.47
CHFRQ96EP1 IGHV3-65-201ENST00000523210 341 ntBASIC17.97■□□□□ 0.47
CHFRQ96EP1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AL355385.1-201ENST00000606123 409 ntBASIC17.97■□□□□ 0.47
CHFRQ96EP1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.97■□□□□ 0.47
CHFRQ96EP1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHFRQ96EP1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 HCG4B-203ENST00000450128 991 ntBASIC17.96■□□□□ 0.47
CHFRQ96EP1 AC018845.2-201ENST00000568326 409 ntBASIC17.96■□□□□ 0.47
CHFRQ96EP1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.96■□□□□ 0.47
CHFRQ96EP1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHFRQ96EP1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.96■□□□□ 0.46
CHFRQ96EP1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 AC135776.1-201ENST00000319817 2481 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 KLF4P1-201ENST00000412782 1185 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 RPS15P9-201ENST00000494093 319 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.95■□□□□ 0.46
CHFRQ96EP1 AC109462.3-201ENST00000573934 613 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 AC008667.4-201ENST00000607370 168 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 AL513190.1-201ENST00000621254 727 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 NCF1C-201ENST00000438382 1427 ntBASIC17.95■□□□□ 0.46
CHFRQ96EP1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHFRQ96EP1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms