Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 AC104390.1-201ENST00000555663 520 ntBASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 AC097493.4-201ENST00000641197 219 ntBASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 AC133963.1-201ENST00000504166 1679 ntBASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RTN4IP1Q8WWV3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.96□□□□□ -0.02
RTN4IP1Q8WWV3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RTN4IP1Q8WWV3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RTN4IP1Q8WWV3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RTN4IP1Q8WWV3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.96□□□□□ -0.02
RTN4IP1Q8WWV3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 AC009065.1-201ENST00000564055 1225 ntBASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 AC012306.2-201ENST00000609350 630 ntBASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.95□□□□□ -0.02
RTN4IP1Q8WWV3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 CROCCP2-202ENST00000412962 2773 ntBASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 LIN28AP1-201ENST00000429574 405 ntBASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 MIR3180-4-201ENST00000582223 153 ntBASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 LINC01126-201ENST00000623515 1646 ntBASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms