Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HLA-J-201ENST00000462773 1622 ntBASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 LINC01451-201ENST00000623792 534 ntBASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM3Q8TF72 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 IGHV3-47-201ENST00000425060 335 ntBASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 AP000867.3-201ENST00000524675 377 ntBASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 AC092329.2-201ENST00000598402 547 ntBASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.04■□□□□ 0.48
SHROOM3Q8TF72 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 FAAHP1-202ENST00000446499 1238 ntBASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 AC125634.1-201ENST00000438758 1403 ntBASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.03■□□□□ 0.48
SHROOM3Q8TF72 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 TSSC2-201ENST00000450217 709 ntBASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHROOM3Q8TF72 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms