Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 DUTP2-201ENST00000519164 463 ntBASIC19.3■□□□□ 0.68
LNX1Q8TBB1 AL662844.1-201ENST00000546340 181 ntBASIC19.3■□□□□ 0.68
LNX1Q8TBB1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 AC005336.2-201ENST00000593183 939 ntBASIC19.3■□□□□ 0.68
LNX1Q8TBB1 AL591684.3-201ENST00000605187 298 ntBASIC19.3■□□□□ 0.68
LNX1Q8TBB1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LNX1Q8TBB1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 PP12613-201ENST00000424958 2230 ntBASIC19.29■□□□□ 0.68
LNX1Q8TBB1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LNX1Q8TBB1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 AC096582.2-201ENST00000510860 516 ntBASIC19.28■□□□□ 0.68
LNX1Q8TBB1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 AC114341.1-201ENST00000618070 349 ntBASIC19.28■□□□□ 0.68
LNX1Q8TBB1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.28■□□□□ 0.68
LNX1Q8TBB1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 FZD10-202ENST00000539839 3282 ntBASIC19.27■□□□□ 0.68
LNX1Q8TBB1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms