Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 AL096865.1-201ENST00000606796 927 ntBASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 AL590787.1-201ENST00000568856 1315 ntBASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHDC9Q8NEP7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC093677.2-201ENST00000600169 1863 ntBASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 BCRP1-201ENST00000444246 691 ntBASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC068137.2-201ENST00000605408 478 ntBASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 REXO1L3P-201ENST00000622202 1288 ntBASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 PI4KAP1-204ENST00000612579 1703 ntBASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.41■□□□□ 0.7
KLHDC9Q8NEP7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 FAM185BP-201ENST00000443595 716 ntBASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 AC004449.1-201ENST00000564240 433 ntBASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHDC9Q8NEP7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHDC9Q8NEP7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KLHDC9Q8NEP7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHDC9Q8NEP7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 ACTG1P4-201ENST00000425123 1122 ntBASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 AC022145.2-201ENST00000598203 171 ntBASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC9Q8NEP7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms