Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 PNMA6B-201ENST00000538162 1200 ntBASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 AC105036.2-201ENST00000569468 176 ntBASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 PRKY-204ENST00000533551 1019 ntBASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC197Q8NCU1 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AF201337.1-201ENST00000520239 748 ntBASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AC008687.6-201ENST00000596318 630 ntBASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 GPAT2P1-201ENST00000444924 1672 ntBASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 AC105917.1-201ENST00000506637 2539 ntBASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC197Q8NCU1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC197Q8NCU1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC197Q8NCU1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC197Q8NCU1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC197Q8NCU1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms