Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 SAPCD2P3-201ENST00000455031 850 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 AC106795.1-205ENST00000512851 1056 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 AF238378.1-201ENST00000526806 358 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 AC109462.3-201ENST00000573934 613 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 AL353593.2-201ENST00000602529 1483 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 GNAS-203ENST00000306120 1878 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 AP005117.1-201ENST00000584346 1413 ntBASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01555Q8NAE3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 PMPCAP1-201ENST00000508114 1576 ntBASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01555Q8NAE3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LINC01555Q8NAE3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
LINC01555Q8NAE3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC01555Q8NAE3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
LINC01555Q8NAE3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01555Q8NAE3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.31
LINC01555Q8NAE3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AC002558.1-201ENST00000488906 803 ntBASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AL121894.2-201ENST00000602977 491 ntBASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01555Q8NAE3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms