Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 LINC00304-203ENST00000565008 1864 ntBASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 FDX1P1-201ENST00000449115 551 ntBASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AC009078.2-202ENST00000463353 338 ntBASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 AC079776.2-201ENST00000641154 1609 ntBASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 SPDYE21P-201ENST00000413323 827 ntBASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 SART3-203ENST00000546611 1184 ntBASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 AC109462.3-201ENST00000573934 613 ntBASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 STK25P1-201ENST00000585406 838 ntBASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 AC073592.5-201ENST00000624854 528 ntBASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARHGEF39Q8N4T4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 AC026396.1-201ENST00000419388 421 ntBASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 RNA5SP419-201ENST00000515908 135 ntBASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ARHGEF39Q8N4T4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms