Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 AD000864.1-201ENST00000624076 2295 ntBASIC21.9■■□□□ 1.1
SMC5Q8IY18 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 AC011498.5-201ENST00000592027 486 ntBASIC21.9■■□□□ 1.1
SMC5Q8IY18 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.9■■□□□ 1.1
SMC5Q8IY18 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC5Q8IY18 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC5Q8IY18 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.89■■□□□ 1.1
SMC5Q8IY18 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMC5Q8IY18 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.89■■□□□ 1.1
SMC5Q8IY18 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMC5Q8IY18 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SMC5Q8IY18 AL121761.2-201ENST00000598007 1648 ntBASIC21.89■■□□□ 1.09
SMC5Q8IY18 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 AL031133.1-201ENST00000406807 723 ntBASIC21.89■■□□□ 1.09
SMC5Q8IY18 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 GUSBP12-201ENST00000513727 720 ntBASIC21.89■■□□□ 1.09
SMC5Q8IY18 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SMC5Q8IY18 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMC5Q8IY18 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 LINC01238-205ENST00000567549 1107 ntBASIC21.88■■□□□ 1.09
SMC5Q8IY18 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SMC5Q8IY18 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC5Q8IY18 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms