Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 RCN1P2-201ENST00000398357 915 ntBASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 AL133373.2-201ENST00000623187 2828 ntBASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM48Q8IWZ4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM48Q8IWZ4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM48Q8IWZ4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM48Q8IWZ4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms