Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 AC002558.1-201ENST00000488906 803 ntBASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 AC096734.2-201ENST00000562054 433 ntBASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 PDPK2P-202ENST00000562415 1191 ntBASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 AC010507.1-201ENST00000633895 436 ntBASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 WIZP1-201ENST00000531444 2299 ntBASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 ELL2P1-201ENST00000413990 1906 ntBASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS4Q8IUM7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
NPAS4Q8IUM7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.89■□□□□ 0.62
NPAS4Q8IUM7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS4Q8IUM7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 LINC00982-205ENST00000420957 435 ntBASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 CNN2P11-201ENST00000429351 262 ntBASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.89■□□□□ 0.61
NPAS4Q8IUM7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AC135776.1-201ENST00000319817 2481 ntBASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 MYCLP1-201ENST00000372451 1075 ntBASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AC004877.2-201ENST00000623941 599 ntBASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS4Q8IUM7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 CEND1P1-201ENST00000451006 455 ntBASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 BCAR1-209ENST00000546196 1340 ntBASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms