Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 AC104417.2-201ENST00000562989 1793 ntBASIC17.88■□□□□ 0.45
PACS2Q86VP3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 AL353708.3-201ENST00000610272 989 ntBASIC17.87■□□□□ 0.45
PACS2Q86VP3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS2Q86VP3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PACS2Q86VP3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 AC090142.2-201ENST00000483263 416 ntBASIC17.86■□□□□ 0.45
PACS2Q86VP3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 MIR4497-201ENST00000583208 89 ntBASIC17.86■□□□□ 0.45
PACS2Q86VP3 AC073195.1-201ENST00000607241 877 ntBASIC17.86■□□□□ 0.45
PACS2Q86VP3 KRT17P2-201ENST00000300992 1314 ntBASIC17.86■□□□□ 0.45
PACS2Q86VP3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS2Q86VP3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS2Q86VP3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PACS2Q86VP3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.85■□□□□ 0.45
PACS2Q86VP3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.85■□□□□ 0.45
PACS2Q86VP3 AL596275.1-201ENST00000423464 877 ntBASIC17.85■□□□□ 0.45
PACS2Q86VP3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.85■□□□□ 0.45
PACS2Q86VP3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS2Q86VP3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms