Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AC018445.3-201ENST00000624177 1945 ntBASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AC009949.1-201ENST00000623048 1830 ntBASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13BQ7Z7G8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC122714.2-201ENST00000502787 707 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC008761.3-201ENST00000624803 892 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AL805961.1-202ENST00000641562 540 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC015922.1-201ENST00000421102 1152 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 WIZP1-201ENST00000531444 2299 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AP000997.3-201ENST00000623333 2250 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC074386.1-202ENST00000463561 864 ntBASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13BQ7Z7G8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 AC004461.1-201ENST00000412461 403 ntBASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 AC096734.2-201ENST00000562054 433 ntBASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms