Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 LINC00602-201ENST00000629776 2065 ntBASIC17.86■□□□□ 0.45
RAPH1Q70E73 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 AL157888.1-201ENST00000631930 593 ntBASIC17.85■□□□□ 0.45
RAPH1Q70E73 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAPH1Q70E73 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.85■□□□□ 0.45
RAPH1Q70E73 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 AD000864.1-201ENST00000624076 2295 ntBASIC17.84■□□□□ 0.45
RAPH1Q70E73 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 AL023806.1-201ENST00000603994 1649 ntBASIC17.84■□□□□ 0.45
RAPH1Q70E73 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 PVRIG2P-201ENST00000435460 978 ntBASIC17.84■□□□□ 0.45
RAPH1Q70E73 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
RAPH1Q70E73 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAPH1Q70E73 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RAPH1Q70E73 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RAPH1Q70E73 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAPH1Q70E73 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms