Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 FLJ38576-201ENST00000623820 2459 ntBASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 RNF152P1-201ENST00000397754 604 ntBASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 GCSHP2-201ENST00000560971 527 ntBASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 AL441883.1-201ENST00000566170 1045 ntBASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 AC011558.1-201ENST00000623459 338 ntBASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF111Q6ZNA4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 KRT8P50-201ENST00000562022 1438 ntBASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 AC104076.2-201ENST00000448912 469 ntBASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 SEC1P-202ENST00000473944 940 ntBASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 AC034232.1-201ENST00000506026 1064 ntBASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 AC104390.1-201ENST00000555663 520 ntBASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF111Q6ZNA4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 TSPY5P-201ENST00000426936 936 ntBASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 AC092647.4-201ENST00000457211 535 ntBASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 DUX4L26-201ENST00000489078 1255 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms