Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AL591424.1-201ENST00000442569 1213 ntBASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AC009947.1-201ENST00000444350 727 ntBASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AC093503.3-201ENST00000624917 2352 ntBASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 AC100803.2-201ENST00000562459 1963 ntBASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 BX842568.4-201ENST00000421222 227 ntBASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 MED15P5-201ENST00000423150 992 ntBASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 AC019129.2-201ENST00000609837 1235 ntBASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC62Q6P9F0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC006557.2-201ENST00000592985 1240 ntBASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC62Q6P9F0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms