Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 MTDHP4-201ENST00000600287 670 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AC025062.2-201ENST00000605477 670 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AC019129.2-201ENST00000609837 1235 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 FAM215A-202ENST00000632077 792 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AL353593.2-201ENST00000602529 1483 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 AC109462.3-201ENST00000573934 613 ntBASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.71■□□□□ 0.75
SWSAP1Q6NVH7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AC132938.5-201ENST00000624980 1813 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AL022342.1-201ENST00000400363 863 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AC093909.1-201ENST00000504731 1122 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AC120114.3-201ENST00000611923 658 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 MIR7706-201ENST00000613747 67 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 BX640515.1-201ENST00000617215 977 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 AC243591.1-201ENST00000452967 1364 ntBASIC19.7■□□□□ 0.74
SWSAP1Q6NVH7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 RPS2P28-201ENST00000314255 741 ntBASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 SPDYE21P-201ENST00000413323 827 ntBASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 OR7E14P-202ENST00000530490 1290 ntBASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 AC073592.4-201ENST00000623827 446 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms