Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 GOLGA2P4-201ENST00000441462 777 ntBASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 AC234783.1-201ENST00000441761 496 ntBASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 AL109936.8-201ENST00000641772 604 ntBASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPF38BQ5VTL8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 AC148477.5-201ENST00000625164 1645 ntBASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 LINC01225-203ENST00000563550 1244 ntBASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF38BQ5VTL8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 AL024508.2-201ENST00000607749 1894 ntBASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 UXT-AS1-201ENST00000590504 1525 ntBASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF38BQ5VTL8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 RARRES2P8-201ENST00000566335 367 ntBASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRPF38BQ5VTL8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms