Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AL158211.5-201ENST00000623583 2518 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 SPDYE14P-201ENST00000442619 822 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 KRT17P8-201ENST00000540749 863 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 SPDYE7P-202ENST00000420373 878 ntBASIC17.05■□□□□ 0.32
RIF1Q5UIP0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AL353779.1-201ENST00000434793 351 ntBASIC17.05■□□□□ 0.32
RIF1Q5UIP0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC069120.2-201ENST00000524091 540 ntBASIC17.05■□□□□ 0.32
RIF1Q5UIP0 KRT8P23-201ENST00000560090 1207 ntBASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC068587.10-201ENST00000641210 219 ntBASIC17.05■□□□□ 0.32
RIF1Q5UIP0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.05■□□□□ 0.32
RIF1Q5UIP0 AC100757.3-201ENST00000622361 1406 ntBASIC17.05■□□□□ 0.32
RIF1Q5UIP0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 AC018445.3-201ENST00000624177 1945 ntBASIC17.04■□□□□ 0.32
RIF1Q5UIP0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 AC079140.1-201ENST00000508039 487 ntBASIC17.04■□□□□ 0.32
RIF1Q5UIP0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 HTR7P1-202ENST00000624664 4411 ntBASIC17.04■□□□□ 0.32
RIF1Q5UIP0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIF1Q5UIP0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 AL499627.1-201ENST00000569373 2188 ntBASIC17.03■□□□□ 0.32
RIF1Q5UIP0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIF1Q5UIP0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms