Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AC087641.1-201ENST00000557561 1021 ntBASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AL512356.2-201ENST00000546955 174 ntBASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13DQ5THJ4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 MEIS3P1-201ENST00000495167 958 ntBASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC093677.2-201ENST00000600169 1863 ntBASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC069262.1-201ENST00000539058 672 ntBASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AC005225.4-201ENST00000557330 545 ntBASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AL035252.4-201ENST00000624174 288 ntBASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 AL590787.1-201ENST00000568856 1315 ntBASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VPS13DQ5THJ4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms