Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 AC004817.3-201ENST00000602957 2129 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 BICD1-207ENST00000551848 1962 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 AC073621.1-201ENST00000392730 636 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 AC136632.2-201ENST00000512891 861 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 RNA5SP415-201ENST00000517246 115 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 AC027601.4-201ENST00000611259 610 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 FAM197Y3-203ENST00000618346 717 ntBASIC19.27■□□□□ 0.68
CDC42EP1Q00587 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP1Q00587 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.27■□□□□ 0.67
CDC42EP1Q00587 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 PMS2P7-201ENST00000506558 1336 ntBASIC19.26■□□□□ 0.67
CDC42EP1Q00587 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 AC104109.2-201ENST00000602919 1418 ntBASIC19.26■□□□□ 0.67
CDC42EP1Q00587 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.26■□□□□ 0.67
CDC42EP1Q00587 SLC25A6P5-201ENST00000435663 894 ntBASIC19.26■□□□□ 0.67
CDC42EP1Q00587 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 AC009113.1-201ENST00000570267 2443 ntBASIC19.26■□□□□ 0.67
CDC42EP1Q00587 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.26■□□□□ 0.67
CDC42EP1Q00587 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP1Q00587 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 AP002414.3-201ENST00000589352 1468 ntBASIC19.25■□□□□ 0.67
CDC42EP1Q00587 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 UNC93B6-202ENST00000528242 690 ntBASIC19.25■□□□□ 0.67
CDC42EP1Q00587 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 TERC-201ENST00000602385 541 ntBASIC19.25■□□□□ 0.67
CDC42EP1Q00587 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42EP1Q00587 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC42EP1Q00587 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDC42EP1Q00587 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms