Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC23.52■■□□□ 1.36
ZC3H6P61129 GREM1-201ENST00000560677 623 ntTSL 4 BASIC23.52■■□□□ 1.36
ZC3H6P61129 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC23.52■■□□□ 1.36
ZC3H6P61129 AC138761.1-201ENST00000584393 385 ntBASIC23.52■■□□□ 1.36
ZC3H6P61129 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC23.52■■□□□ 1.36
ZC3H6P61129 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H6P61129 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H6P61129 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
ZC3H6P61129 PI4KAP1-204ENST00000612579 1703 ntBASIC23.52■■□□□ 1.36
ZC3H6P61129 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.52■■□□□ 1.36
ZC3H6P61129 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H6P61129 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H6P61129 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.52■■□□□ 1.36
ZC3H6P61129 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.52■■□□□ 1.36
ZC3H6P61129 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H6P61129 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.51■■□□□ 1.35
ZC3H6P61129 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.51■■□□□ 1.35
ZC3H6P61129 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC23.51■■□□□ 1.35
ZC3H6P61129 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 PAWRP1-201ENST00000451083 565 ntBASIC23.51■■□□□ 1.35
ZC3H6P61129 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.51■■□□□ 1.35
ZC3H6P61129 AC068137.2-201ENST00000605408 478 ntBASIC23.51■■□□□ 1.35
ZC3H6P61129 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.51■■□□□ 1.35
ZC3H6P61129 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.51■■□□□ 1.35
ZC3H6P61129 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 AC009336.1-201ENST00000608941 1553 ntBASIC23.51■■□□□ 1.35
ZC3H6P61129 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
ZC3H6P61129 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H6P61129 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.5■■□□□ 1.35
ZC3H6P61129 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.5■■□□□ 1.35
ZC3H6P61129 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
ZC3H6P61129 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 AC120498.9-201ENST00000339021 3867 ntBASIC23.5■■□□□ 1.35
ZC3H6P61129 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
ZC3H6P61129 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.5■■□□□ 1.35
ZC3H6P61129 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 AC244107.1-201ENST00000442033 332 ntBASIC23.5■■□□□ 1.35
ZC3H6P61129 CXCL1P1-201ENST00000502804 216 ntBASIC23.5■■□□□ 1.35
ZC3H6P61129 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.5■■□□□ 1.35
ZC3H6P61129 AC025678.2-201ENST00000562061 970 ntBASIC23.5■■□□□ 1.35
ZC3H6P61129 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.5■■□□□ 1.35
ZC3H6P61129 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
ZC3H6P61129 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H6P61129 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.5■■□□□ 1.35
ZC3H6P61129 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.49■■□□□ 1.35
ZC3H6P61129 AC006116.8-202ENST00000587620 1550 ntBASIC23.49■■□□□ 1.35
ZC3H6P61129 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 AL096828.2-201ENST00000567259 1965 ntBASIC23.49■■□□□ 1.35
ZC3H6P61129 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
ZC3H6P61129 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
ZC3H6P61129 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC23.49■■□□□ 1.35
ZC3H6P61129 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.49■■□□□ 1.35
ZC3H6P61129 REXO1L3P-201ENST00000622202 1288 ntBASIC23.49■■□□□ 1.35
ZC3H6P61129 LINC00628-201ENST00000628516 1289 ntBASIC23.49■■□□□ 1.35
ZC3H6P61129 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC23.49■■□□□ 1.35
ZC3H6P61129 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 AC009949.1-201ENST00000623048 1830 ntBASIC23.49■■□□□ 1.35
ZC3H6P61129 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
ZC3H6P61129 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H6P61129 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H6P61129 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H6P61129 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.48■■□□□ 1.35
ZC3H6P61129 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H6P61129 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
ZC3H6P61129 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms