Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB38P57729 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RAB38P57729 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RAB38P57729 TSPY19P-201ENST00000418461 509 ntBASIC16.66■□□□□ 0.26
RAB38P57729 AC005104.2-201ENST00000427818 678 ntBASIC16.66■□□□□ 0.26
RAB38P57729 TSPY18P-201ENST00000441642 509 ntBASIC16.66■□□□□ 0.26
RAB38P57729 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB38P57729 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.66■□□□□ 0.26
RAB38P57729 AL591684.3-201ENST00000605187 298 ntBASIC16.66■□□□□ 0.26
RAB38P57729 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB38P57729 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB38P57729 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB38P57729 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RAB38P57729 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB38P57729 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB38P57729 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 REXO1L11P-201ENST00000620964 1927 ntBASIC16.65■□□□□ 0.26
RAB38P57729 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB38P57729 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 AC002558.1-201ENST00000488906 803 ntBASIC16.65■□□□□ 0.26
RAB38P57729 KRT18P31-201ENST00000506277 1292 ntBASIC16.65■□□□□ 0.26
RAB38P57729 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB38P57729 AC091304.2-201ENST00000564639 760 ntBASIC16.65■□□□□ 0.26
RAB38P57729 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB38P57729 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RAB38P57729 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 LINC00304-203ENST00000565008 1864 ntBASIC16.65■□□□□ 0.26
RAB38P57729 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB38P57729 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB38P57729 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB38P57729 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAB38P57729 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
RAB38P57729 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB38P57729 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB38P57729 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB38P57729 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms