Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 AC093677.2-201ENST00000600169 1863 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN20P56880 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN20P56880 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 TSPY12P-201ENST00000421279 868 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 RN7SL606P-201ENST00000472779 293 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 KRT18P56-201ENST00000507275 550 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN20P56880 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 TPSP2-201ENST00000561760 610 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.27■□□□□ 0.2
CLDN20P56880 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.27■□□□□ 0.2
CLDN20P56880 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CLDN20P56880 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN20P56880 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
CLDN20P56880 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN20P56880 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN20P56880 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN20P56880 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN20P56880 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN20P56880 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN20P56880 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CLDN20P56880 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN20P56880 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN20P56880 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN20P56880 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN20P56880 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN20P56880 AC132938.6-201ENST00000623828 1655 ntBASIC16.26■□□□□ 0.19
CLDN20P56880 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN20P56880 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN20P56880 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN20P56880 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CLDN20P56880 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CLDN20P56880 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN20P56880 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN20P56880 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CLDN20P56880 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 DRAXINP1-201ENST00000437611 948 ntBASIC16.25■□□□□ 0.19
CLDN20P56880 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN20P56880 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN20P56880 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN20P56880 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN20P56880 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN20P56880 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 AL096828.2-201ENST00000567259 1965 ntBASIC16.25■□□□□ 0.19
CLDN20P56880 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN20P56880 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms