Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CLDN12P56749 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLDN12P56749 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN12P56749 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CLDN12P56749 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN12P56749 AC009949.1-201ENST00000623048 1830 ntBASIC15.44■□□□□ 0.06
CLDN12P56749 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.44■□□□□ 0.06
CLDN12P56749 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CLDN12P56749 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN12P56749 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 AC060834.1-201ENST00000443027 2032 ntBASIC15.43■□□□□ 0.06
CLDN12P56749 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
CLDN12P56749 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN12P56749 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.43■□□□□ 0.06
CLDN12P56749 AC116562.2-201ENST00000507042 360 ntBASIC15.43■□□□□ 0.06
CLDN12P56749 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.43■□□□□ 0.06
CLDN12P56749 AC104390.1-201ENST00000555663 520 ntBASIC15.43■□□□□ 0.06
CLDN12P56749 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN12P56749 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN12P56749 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CLDN12P56749 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN12P56749 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN12P56749 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN12P56749 AC046158.3-201ENST00000624947 2558 ntBASIC15.42■□□□□ 0.06
CLDN12P56749 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLDN12P56749 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN12P56749 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN12P56749 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN12P56749 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 AP003041.3-201ENST00000527151 707 ntBASIC15.42■□□□□ 0.06
CLDN12P56749 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.42■□□□□ 0.06
CLDN12P56749 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.42■□□□□ 0.06
CLDN12P56749 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CLDN12P56749 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
CLDN12P56749 AC112497.1-201ENST00000624824 639 ntBASIC15.42■□□□□ 0.06
CLDN12P56749 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN12P56749 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN12P56749 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms