Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL358472.4-201ENST00000633140 710 ntBASIC16.27■□□□□ 0.2
CDH11P55287 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH11P55287 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH11P55287 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDH11P55287 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.27■□□□□ 0.19
CDH11P55287 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 HOXB1-202ENST00000577092 1414 ntBASIC16.27■□□□□ 0.19
CDH11P55287 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CDH11P55287 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH11P55287 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CDH11P55287 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
CDH11P55287 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 AL031133.1-201ENST00000406807 723 ntBASIC16.26■□□□□ 0.19
CDH11P55287 KRT18P23-201ENST00000435622 1283 ntBASIC16.26■□□□□ 0.19
CDH11P55287 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 AL671277.2-201ENST00000458060 996 ntBASIC16.26■□□□□ 0.19
CDH11P55287 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH11P55287 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDH11P55287 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDH11P55287 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH11P55287 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH11P55287 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH11P55287 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 UPK3BP1-201ENST00000428678 509 ntBASIC16.25■□□□□ 0.19
CDH11P55287 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH11P55287 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH11P55287 AC009065.1-201ENST00000564055 1225 ntBASIC16.25■□□□□ 0.19
CDH11P55287 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH11P55287 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 KRT8P7-201ENST00000533003 1432 ntBASIC16.25■□□□□ 0.19
CDH11P55287 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms