Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAD23BP54727 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.96■□□□□ 0.63
RAD23BP54727 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAD23BP54727 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.96■□□□□ 0.63
RAD23BP54727 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RAD23BP54727 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
RAD23BP54727 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 AC010460.3-201ENST00000511359 1579 ntBASIC18.96■□□□□ 0.63
RAD23BP54727 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 AC134043.2-201ENST00000624206 2238 ntBASIC18.96■□□□□ 0.63
RAD23BP54727 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAD23BP54727 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD23BP54727 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD23BP54727 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RAD23BP54727 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.95■□□□□ 0.62
RAD23BP54727 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.95■□□□□ 0.62
RAD23BP54727 DDX43P3-201ENST00000441064 443 ntBASIC18.95■□□□□ 0.62
RAD23BP54727 HCG4P8-203ENST00000443049 980 ntBASIC18.95■□□□□ 0.62
RAD23BP54727 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.95■□□□□ 0.62
RAD23BP54727 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.95■□□□□ 0.62
RAD23BP54727 AC074051.2-201ENST00000565115 352 ntBASIC18.95■□□□□ 0.62
RAD23BP54727 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.95■□□□□ 0.62
RAD23BP54727 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.95■□□□□ 0.62
RAD23BP54727 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD23BP54727 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD23BP54727 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RAD23BP54727 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD23BP54727 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAD23BP54727 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAD23BP54727 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 NSUN5P1-202ENST00000421140 1535 ntBASIC18.95■□□□□ 0.62
RAD23BP54727 NSUN5P2-203ENST00000457352 1529 ntBASIC18.95■□□□□ 0.62
RAD23BP54727 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.95■□□□□ 0.62
RAD23BP54727 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD23BP54727 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
RAD23BP54727 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAD23BP54727 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RAD23BP54727 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.94■□□□□ 0.62
RAD23BP54727 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RAD23BP54727 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.94■□□□□ 0.62
RAD23BP54727 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.94■□□□□ 0.62
RAD23BP54727 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 AC012615.1-201ENST00000565797 1299 ntBASIC18.94■□□□□ 0.62
RAD23BP54727 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.94■□□□□ 0.62
RAD23BP54727 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.94■□□□□ 0.62
RAD23BP54727 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.94■□□□□ 0.62
RAD23BP54727 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.94■□□□□ 0.62
RAD23BP54727 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD23BP54727 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RAD23BP54727 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.93■□□□□ 0.62
RAD23BP54727 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RAD23BP54727 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD23BP54727 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAD23BP54727 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms