Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATN1P54259 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ATN1P54259 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.46■□□□□ 0.71
ATN1P54259 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ATN1P54259 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATN1P54259 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.46■□□□□ 0.71
ATN1P54259 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATN1P54259 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATN1P54259 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
ATN1P54259 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATN1P54259 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
ATN1P54259 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.45■□□□□ 0.7
ATN1P54259 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATN1P54259 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.45■□□□□ 0.7
ATN1P54259 AC190387.1-201ENST00000551683 408 ntBASIC19.45■□□□□ 0.7
ATN1P54259 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.45■□□□□ 0.7
ATN1P54259 AL035252.4-201ENST00000624174 288 ntBASIC19.45■□□□□ 0.7
ATN1P54259 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.45■□□□□ 0.7
ATN1P54259 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATN1P54259 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATN1P54259 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.44■□□□□ 0.7
ATN1P54259 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.44■□□□□ 0.7
ATN1P54259 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATN1P54259 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.44■□□□□ 0.7
ATN1P54259 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.44■□□□□ 0.7
ATN1P54259 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC19.44■□□□□ 0.7
ATN1P54259 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 AC023141.5-201ENST00000458585 616 ntBASIC19.44■□□□□ 0.7
ATN1P54259 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.44■□□□□ 0.7
ATN1P54259 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.44■□□□□ 0.7
ATN1P54259 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
ATN1P54259 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.44■□□□□ 0.7
ATN1P54259 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATN1P54259 AC022145.2-201ENST00000598203 171 ntBASIC19.44■□□□□ 0.7
ATN1P54259 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.44■□□□□ 0.7
ATN1P54259 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 AF228730.6-201ENST00000641497 218 ntBASIC19.44■□□□□ 0.7
ATN1P54259 AC084121.3-201ENST00000641716 218 ntBASIC19.44■□□□□ 0.7
ATN1P54259 AC105233.6-201ENST00000642093 218 ntBASIC19.44■□□□□ 0.7
ATN1P54259 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
ATN1P54259 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATN1P54259 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.44■□□□□ 0.7
ATN1P54259 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.44■□□□□ 0.7
ATN1P54259 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATN1P54259 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.44■□□□□ 0.7
ATN1P54259 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATN1P54259 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATN1P54259 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.43■□□□□ 0.7
ATN1P54259 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ATN1P54259 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.43■□□□□ 0.7
ATN1P54259 AC097637.2-201ENST00000624096 1997 ntBASIC19.43■□□□□ 0.7
ATN1P54259 AC003669.1-201ENST00000334569 611 ntBASIC19.43■□□□□ 0.7
ATN1P54259 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.43■□□□□ 0.7
ATN1P54259 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 AC093214.1-201ENST00000511688 1107 ntBASIC19.43■□□□□ 0.7
ATN1P54259 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.43■□□□□ 0.7
ATN1P54259 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.43■□□□□ 0.7
ATN1P54259 AL390955.2-201ENST00000603032 514 ntBASIC19.43■□□□□ 0.7
ATN1P54259 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.43■□□□□ 0.7
ATN1P54259 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.43■□□□□ 0.7
ATN1P54259 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATN1P54259 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
ATN1P54259 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms