Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.14■□□□□ 0.49
ATXN3P54252 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATXN3P54252 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.14■□□□□ 0.49
ATXN3P54252 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.14■□□□□ 0.49
ATXN3P54252 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATXN3P54252 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
ATXN3P54252 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATXN3P54252 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATXN3P54252 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATXN3P54252 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.13■□□□□ 0.49
ATXN3P54252 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.13■□□□□ 0.49
ATXN3P54252 TERC-201ENST00000602385 541 ntBASIC18.13■□□□□ 0.49
ATXN3P54252 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.13■□□□□ 0.49
ATXN3P54252 TP73-AS1-207ENST00000624167 988 ntBASIC18.13■□□□□ 0.49
ATXN3P54252 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ATXN3P54252 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATXN3P54252 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.13■□□□□ 0.49
ATXN3P54252 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATXN3P54252 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.13■□□□□ 0.49
ATXN3P54252 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.12■□□□□ 0.49
ATXN3P54252 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
ATXN3P54252 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.12■□□□□ 0.49
ATXN3P54252 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.12■□□□□ 0.49
ATXN3P54252 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.12■□□□□ 0.49
ATXN3P54252 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.12■□□□□ 0.49
ATXN3P54252 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATXN3P54252 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 RNPS1P1-201ENST00000507437 918 ntBASIC18.12■□□□□ 0.49
ATXN3P54252 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.12■□□□□ 0.49
ATXN3P54252 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATXN3P54252 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATXN3P54252 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.12■□□□□ 0.49
ATXN3P54252 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATXN3P54252 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATXN3P54252 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATXN3P54252 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATXN3P54252 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
ATXN3P54252 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.11■□□□□ 0.49
ATXN3P54252 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ATXN3P54252 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.11■□□□□ 0.49
ATXN3P54252 MIR940-201ENST00000401276 94 ntBASIC18.11■□□□□ 0.49
ATXN3P54252 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.11■□□□□ 0.49
ATXN3P54252 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.11■□□□□ 0.49
ATXN3P54252 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.11■□□□□ 0.49
ATXN3P54252 SLC25A1P1-201ENST00000528351 927 ntBASIC18.11■□□□□ 0.49
ATXN3P54252 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.11■□□□□ 0.49
ATXN3P54252 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.11■□□□□ 0.49
ATXN3P54252 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.11■□□□□ 0.49
ATXN3P54252 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
ATXN3P54252 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.11■□□□□ 0.49
ATXN3P54252 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.11■□□□□ 0.49
ATXN3P54252 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.11■□□□□ 0.49
ATXN3P54252 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.11■□□□□ 0.49
ATXN3P54252 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
ATXN3P54252 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATXN3P54252 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.11■□□□□ 0.49
ATXN3P54252 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms