Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.82■□□□□ 0.76
LBX1P52954 STK19B-204ENST00000512515 211 ntBASIC19.82■□□□□ 0.76
LBX1P52954 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.82■□□□□ 0.76
LBX1P52954 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LBX1P52954 COX11-210ENST00000639671 696 ntBASIC19.82■□□□□ 0.76
LBX1P52954 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LBX1P52954 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LBX1P52954 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LBX1P52954 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LBX1P52954 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.82■□□□□ 0.76
LBX1P52954 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LBX1P52954 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LBX1P52954 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 AC132938.6-201ENST00000623828 1655 ntBASIC19.81■□□□□ 0.76
LBX1P52954 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 ACTBP11-201ENST00000436287 1126 ntBASIC19.81■□□□□ 0.76
LBX1P52954 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 KRT223P-202ENST00000449164 1292 ntBASIC19.81■□□□□ 0.76
LBX1P52954 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.81■□□□□ 0.76
LBX1P52954 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.81■□□□□ 0.76
LBX1P52954 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.81■□□□□ 0.76
LBX1P52954 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.81■□□□□ 0.76
LBX1P52954 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.81■□□□□ 0.76
LBX1P52954 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LBX1P52954 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
LBX1P52954 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LBX1P52954 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.8■□□□□ 0.76
LBX1P52954 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
LBX1P52954 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.8■□□□□ 0.76
LBX1P52954 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.8■□□□□ 0.76
LBX1P52954 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.8■□□□□ 0.76
LBX1P52954 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.8■□□□□ 0.76
LBX1P52954 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.8■□□□□ 0.76
LBX1P52954 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.8■□□□□ 0.76
LBX1P52954 RN7SL219P-201ENST00000582872 296 ntBASIC19.8■□□□□ 0.76
LBX1P52954 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 AL161645.1-201ENST00000622716 1255 ntBASIC19.8■□□□□ 0.76
LBX1P52954 AL645728.2-201ENST00000641974 660 ntBASIC19.8■□□□□ 0.76
LBX1P52954 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.8■□□□□ 0.76
LBX1P52954 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 AC018445.3-201ENST00000624177 1945 ntBASIC19.8■□□□□ 0.76
LBX1P52954 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
LBX1P52954 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LBX1P52954 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.79■□□□□ 0.76
LBX1P52954 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.79■□□□□ 0.76
LBX1P52954 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.79■□□□□ 0.76
LBX1P52954 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.79■□□□□ 0.76
LBX1P52954 AP005482.1-201ENST00000563722 1273 ntBASIC19.79■□□□□ 0.76
LBX1P52954 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.79■□□□□ 0.76
LBX1P52954 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.79■□□□□ 0.76
LBX1P52954 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 AC133552.6-201ENST00000613406 534 ntBASIC19.79■□□□□ 0.76
LBX1P52954 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.79■□□□□ 0.76
LBX1P52954 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.79■□□□□ 0.76
LBX1P52954 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LBX1P52954 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.79■□□□□ 0.76
LBX1P52954 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.78■□□□□ 0.76
LBX1P52954 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LBX1P52954 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LBX1P52954 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.78■□□□□ 0.76
LBX1P52954 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.78■□□□□ 0.76
LBX1P52954 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms